ODT00224.1 protein (Gemmatimonadetes bacterium SCN7022)

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

ODT00224.1

RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (776 aa)

Predicted Functional Partners:

rpoA

0.929

rpoB

0.910

ODT04652.1

0.899

ODT05044.1

0.625

ODT03614.1

0.532

ODT00225.1

0.476

ODS99744.1

0.457

ODT05167.1

0.441

ODT02360.1

0.441

ODT02361.1

0.441

Your Current Organism:

Gemmatimonadetes bacterium SCN7022

NCBI taxonomy Id: 1660163
Other names: G. bacterium SCN 70-22, Gemmatimonadetes bacterium SCN 70-22

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ODS99744.1	ODT00224.1	ABS52_19615	ABS52_18830	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
ODS99744.1	ODT02360.1	ABS52_19615	ABS52_14175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.903
ODS99744.1	ODT02361.1	ABS52_19615	ABS52_14185	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.903
ODS99744.1	ODT03614.1	ABS52_19615	ABS52_08385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
ODS99744.1	ODT04652.1	ABS52_19615	ABS52_03375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.652
ODS99744.1	ODT05044.1	ABS52_19615	ABS52_02520	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.500
ODS99744.1	ODT05167.1	ABS52_19615	ABS52_00200	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.921
ODS99744.1	rpoA	ABS52_19615	ABS52_15800	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.849
ODS99744.1	rpoB	ABS52_19615	ABS52_14485	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.733
ODT00224.1	ODS99744.1	ABS52_18830	ABS52_19615	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.457
ODT00224.1	ODT00225.1	ABS52_18830	ABS52_18835	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.476
ODT00224.1	ODT02360.1	ABS52_18830	ABS52_14175	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.441
ODT00224.1	ODT02361.1	ABS52_18830	ABS52_14185	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.441
ODT00224.1	ODT03614.1	ABS52_18830	ABS52_08385	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
ODT00224.1	ODT04652.1	ABS52_18830	ABS52_03375	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.899
ODT00224.1	ODT05044.1	ABS52_18830	ABS52_02520	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.625
ODT00224.1	ODT05167.1	ABS52_18830	ABS52_00200	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.441
ODT00224.1	rpoA	ABS52_18830	ABS52_15800	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.929
ODT00224.1	rpoB	ABS52_18830	ABS52_14485	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
ODT00225.1	ODT00224.1	ABS52_18835	ABS52_18830	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476