STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHU88684.1ADP-ribose diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)    
Predicted Functional Partners:
AHU88683.1
Integral membrane protein MviN; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.903
AHU90338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.790
AHU88682.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
recN
DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA.
     
 0.703
nadK
Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
    0.677
AHU88681.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
AHU88678.1
Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
sufB
Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
sufD
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
AHU88685.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
Your Current Organism:
Trueperella pyogenes
NCBI taxonomy Id: 1661
Other names: ATCC 19411, Actinomyces pyogenes, Arcanibacterium pyogenes, Arcanobacterium pyogenes, Bacillus pyogenes, CCUG 13230, CIP 103129, Corynebacterium pyogenes, DSM 20630, LMG 16162, LMG:16162, NCTC 5224, T. pyogenes, strain C-100
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