STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001320525_00547Unannotated protein. (478 aa)    
Predicted Functional Partners:
GCA_001320525_04984
Unannotated protein.
  
     0.745
GCA_001320525_00548
Unannotated protein.
  
    0.607
GCA_001320525_00549
Unannotated protein.
       0.588
GCA_001320525_00486
Unannotated protein.
    
  0.580
GCA_001320525_00546
Unannotated protein.
  
    0.574
GCA_001320525_01884
Unannotated protein.
 
    0.561
GCA_001320525_01319
Unannotated protein.
  
    0.504
GCA_001320525_00545
Unannotated protein.
       0.503
GCA_001320525_01280
Unannotated protein.
   
    0.499
GCA_001320525_01312
Unannotated protein.
  
    0.496
Your Current Organism:
Pseudomonas sp. NBRC111131
NCBI taxonomy Id: 1661046
Other names: P. sp. NBRC 111131, Pseudomonas sp. NBRC 111131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.