STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001320525_00939Unannotated protein. (1497 aa)    
Predicted Functional Partners:
GCA_001320525_01771
Unannotated protein.
  
  
 0.775
GCA_001320525_00470
Unannotated protein.
  
     0.773
GCA_001320525_04106
Unannotated protein.
 
     0.771
GCA_001320525_02667
Unannotated protein.
  
     0.770
GCA_001320525_01216
Unannotated protein.
 
     0.768
GCA_001320525_00404
Unannotated protein.
  
     0.767
GCA_001320525_00963
Unannotated protein.
  
     0.767
GCA_001320525_01260
Unannotated protein.
  
     0.766
GCA_001320525_04854
Unannotated protein.
 
  
 0.765
GCA_001320525_01190
Unannotated protein.
  
     0.762
Your Current Organism:
Pseudomonas sp. NBRC111131
NCBI taxonomy Id: 1661046
Other names: P. sp. NBRC 111131, Pseudomonas sp. NBRC 111131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.