STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001320525_01137Unannotated protein. (94 aa)    
Predicted Functional Partners:
GCA_001320525_00133
Unannotated protein.
   
    0.763
GCA_001320525_05305
Unannotated protein.
  
    0.667
GCA_001320525_03484
Unannotated protein.
  
    0.660
GCA_001320525_01138
Unannotated protein.
 
     0.659
GCA_001320525_04051
Unannotated protein.
  
     0.659
GCA_001320525_03664
Unannotated protein.
  
    0.625
GCA_001320525_01250
Unannotated protein.
  
    0.615
GCA_001320525_01251
Unannotated protein.
  
    0.602
GCA_001320525_02234
Unannotated protein.
  
     0.602
GCA_001320525_01136
Unannotated protein.
       0.589
Your Current Organism:
Pseudomonas sp. NBRC111131
NCBI taxonomy Id: 1661046
Other names: P. sp. NBRC 111131, Pseudomonas sp. NBRC 111131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.