STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001320525_03450Unannotated protein. (257 aa)    
Predicted Functional Partners:
GCA_001320525_03451
Unannotated protein.
 
 0.999
GCA_001320525_02753
Unannotated protein.
 
 0.994
GCA_001320525_03448
Unannotated protein.
 
 
 0.992
GCA_001320525_03874
Unannotated protein.
  
 
 
0.990
GCA_001320525_03449
Unannotated protein.
  
 0.971
GCA_001320525_02755
Unannotated protein.
 
 
 0.942
GCA_001320525_02752
Unannotated protein.
  
 
 0.902
GCA_001320525_02022
Unannotated protein.
  
  
 0.857
GCA_001320525_05348
Unannotated protein.
     
 0.852
GCA_001320525_02049
Unannotated protein.
  
  
 
0.847
Your Current Organism:
Pseudomonas sp. NBRC111131
NCBI taxonomy Id: 1661046
Other names: P. sp. NBRC 111131, Pseudomonas sp. NBRC 111131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.