STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDFB_001409CUB and/or Ldl recept a domain containing protein. (1047 aa)    
Predicted Functional Partners:
BDFB_003023
Pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.600
BDFB_011484
HSBP1 domain containing protein.
      
 0.546
BDFB_003266
Phosphatidylinositide phosphatase SAC1.
    
 0.468
BDFB_012947
Disabled.
    
 0.460
BDFB_008216
Furin-like, Recep L domain, and/or GF recep IV domain containing protein.
   
 0.458
BDFB_011862
GF recep IV, Furin-like, and/or VSP domain containing protein.
   
 0.458
BDFB_004235
Eyes shut.
    
 0.452
BDFB_011402
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.436
BDFB_005913
RhoGEF and/or C2 domain containing protein.
    
 0.431
Ciao1
Probable cytosolic iron-sulfur protein assembly protein Ciao1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
      
 0.420
Your Current Organism:
Asbolus verrucosus
NCBI taxonomy Id: 1661398
Other names: A. verrucosus, Cryptoglossa verrucosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.