STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001510335_00188Unannotated protein. (183 aa)    
Predicted Functional Partners:
GCA_001510335_00189
Unannotated protein.
 
 
 0.999
GCA_001510335_00190
Unannotated protein.
 
 0.999
GCA_001510335_00187
Unannotated protein.
 
 
 0.995
GCA_001510335_00282
Unannotated protein.
  
 
 0.932
GCA_001510335_01440
Unannotated protein.
  
 
 0.899
GCA_001510335_00277
Unannotated protein.
  
  
 0.884
GCA_001510335_00283
Unannotated protein.
  
 
 0.809
GCA_001510335_01369
Unannotated protein.
  
 
 0.657
GCA_001510335_01453
Unannotated protein.
   
 
  0.607
GCA_001510335_00455
Unannotated protein.
    
 0.570
Your Current Organism:
Actinobacteria bacterium caspactino2
NCBI taxonomy Id: 1661699
Other names: A. bacterium casp-actino2, Actinobacteria bacterium casp-actino2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.