STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044195_00150Unannotated protein. (415 aa)    
Predicted Functional Partners:
GCA_001044195_00149
Unannotated protein.
 
0.999
GCA_001044195_00145
Unannotated protein.
 
 
 
 0.981
GCA_001044195_00261
Unannotated protein.
 
 
 
 0.973
GCA_001044195_01079
Unannotated protein.
  
 
 0.951
GCA_001044195_01082
Unannotated protein.
  
 
 0.946
GCA_001044195_00142
Unannotated protein.
 
  
 0.932
GCA_001044195_01288
Unannotated protein.
  
 
 
 0.915
GCA_001044195_00143
Unannotated protein.
 
 
 0.910
GCA_001044195_00144
Unannotated protein.
 
   
 0.855
GCA_001044195_01379
Unannotated protein.
 
 
 0.847
Your Current Organism:
Achromatium palustre
NCBI taxonomy Id: 1662188
Other names: C. Achromatium palustre, Candidatus Achromatium palustre
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.