STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044195_00445Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_001044195_00321
Unannotated protein.
 
 0.997
GCA_001044195_03208
Unannotated protein.
  
 0.995
GCA_001044195_01783
Unannotated protein.
   
 0.964
GCA_001044195_00446
Unannotated protein.
 
 
 0.958
GCA_001044195_02828
Unannotated protein.
   
 0.932
GCA_001044195_01949
Unannotated protein.
  
 0.929
GCA_001044195_02442
Unannotated protein.
    
 0.867
GCA_001044195_02777
Unannotated protein.
    
 0.850
GCA_001044195_00933
Unannotated protein.
 
  
 0.825
GCA_001044195_00555
Unannotated protein.
    
 0.822
Your Current Organism:
Achromatium palustre
NCBI taxonomy Id: 1662188
Other names: C. Achromatium palustre, Candidatus Achromatium palustre
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.