STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044195_00855Unannotated protein. (291 aa)    
Predicted Functional Partners:
GCA_001044195_00209
Unannotated protein.
  
 
  0.911
GCA_001044195_03260
Unannotated protein.
   
  0.854
GCA_001044195_01440
Unannotated protein.
    
  0.853
GCA_001044195_01402
Unannotated protein.
    
  0.814
GCA_001044195_02384
Unannotated protein.
   
  0.805
GCA_001044195_00013
Unannotated protein.
    
  0.797
GCA_001044195_00517
Unannotated protein.
   
  0.648
GCA_001044195_03253
Unannotated protein.
   
  0.648
GCA_001044195_00419
Unannotated protein.
    
  0.642
GCA_001044195_02677
Unannotated protein.
    
  0.642
Your Current Organism:
Achromatium palustre
NCBI taxonomy Id: 1662188
Other names: C. Achromatium palustre, Candidatus Achromatium palustre
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.