STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044195_01574Unannotated protein. (407 aa)    
Predicted Functional Partners:
GCA_001044195_01575
Unannotated protein.
 
  
 0.985
GCA_001044195_03256
Unannotated protein.
    
 0.961
GCA_001044195_01303
Unannotated protein.
     
 0.945
GCA_001044195_01352
Unannotated protein.
     
 0.876
GCA_001044195_03259
Unannotated protein.
     
 0.876
GCA_001044195_01351
Unannotated protein.
     
 0.850
GCA_001044195_01079
Unannotated protein.
  
 
 0.837
GCA_001044195_02250
Unannotated protein.
     
 0.801
GCA_001044195_02431
Unannotated protein.
     
 0.801
GCA_001044195_00533
Unannotated protein.
     
 0.800
Your Current Organism:
Achromatium palustre
NCBI taxonomy Id: 1662188
Other names: C. Achromatium palustre, Candidatus Achromatium palustre
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.