STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044195_01591Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_001044195_00273
Unannotated protein.
 
  
 0.876
GCA_001044195_01550
Unannotated protein.
  
  
 
0.844
GCA_001044195_00941
Unannotated protein.
    
 0.817
GCA_001044195_01590
Unannotated protein.
  
  
 0.764
GCA_001044195_03010
Unannotated protein.
  
    0.757
GCA_001044195_02029
Unannotated protein.
  
 0.643
GCA_001044195_01149
Unannotated protein.
   
 
 0.544
GCA_001044195_02446
Unannotated protein.
    
 0.522
GCA_001044195_01589
Unannotated protein.
       0.505
GCA_001044195_02628
Unannotated protein.
  
 
 0.500
Your Current Organism:
Achromatium palustre
NCBI taxonomy Id: 1662188
Other names: C. Achromatium palustre, Candidatus Achromatium palustre
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.