STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044195_02050Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_001044195_02823
Unannotated protein.
 
 
 0.974
GCA_001044195_01745
Unannotated protein.
 
  
 0.849
GCA_001044195_00258
Unannotated protein.
 
      0.802
GCA_001044195_01348
Unannotated protein.
    
  0.792
GCA_001044195_02049
Unannotated protein.
       0.709
GCA_001044195_02567
Unannotated protein.
     
 0.695
GCA_001044195_03223
Unannotated protein.
     
 0.611
GCA_001044195_02644
Unannotated protein.
  
  
 0.495
GCA_001044195_02051
Unannotated protein.
       0.490
Your Current Organism:
Achromatium palustre
NCBI taxonomy Id: 1662188
Other names: C. Achromatium palustre, Candidatus Achromatium palustre
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.