STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550065_00108Unannotated protein. (289 aa)    
Predicted Functional Partners:
GCA_001550065_03566
Unannotated protein.
  
     0.732
GCA_001550065_03274
Unannotated protein.
  
     0.724
GCA_001550065_03636
Unannotated protein.
  
     0.655
GCA_001550065_00107
Unannotated protein.
       0.534
GCA_001550065_00105
Unannotated protein.
       0.523
GCA_001550065_00106
Unannotated protein.
       0.523
GCA_001550065_00110
Unannotated protein.
 
     0.508
GCA_001550065_00104
Unannotated protein.
  
    0.483
GCA_001550065_00109
Unannotated protein.
       0.436
GCA_001550065_00111
Unannotated protein.
       0.436
Your Current Organism:
Kordiimonas lipolytica
NCBI taxonomy Id: 1662421
Other names: CGMCC 1.15304, JCM 30877, K. lipolytica, Kordiimonas lipolytica Wu et al. 2016, Kordiimonas sp. M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.