STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550065_00298Unannotated protein. (920 aa)    
Predicted Functional Partners:
GCA_001550065_02312
Unannotated protein.
 0.998
GCA_001550065_02497
Unannotated protein.
 0.998
GCA_001550065_03095
Unannotated protein.
  
 0.983
GCA_001550065_00555
Unannotated protein.
   
 
 0.902
GCA_001550065_02903
Unannotated protein.
    
 
 0.891
GCA_001550065_00654
Unannotated protein.
  
  
 0.744
GCA_001550065_04161
Unannotated protein.
  
  
 0.716
GCA_001550065_01232
Unannotated protein.
 
  
 0.689
GCA_001550065_02221
Unannotated protein.
   
  
 0.660
GCA_001550065_04184
Unannotated protein.
   
  
 0.644
Your Current Organism:
Kordiimonas lipolytica
NCBI taxonomy Id: 1662421
Other names: CGMCC 1.15304, JCM 30877, K. lipolytica, Kordiimonas lipolytica Wu et al. 2016, Kordiimonas sp. M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.