STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550065_00411Unannotated protein. (385 aa)    
Predicted Functional Partners:
GCA_001550065_00402
Unannotated protein.
 
0.993
GCA_001550065_04165
Unannotated protein.
   
 0.976
GCA_001550065_04185
Unannotated protein.
   
 
 0.968
GCA_001550065_04166
Unannotated protein.
  
 
 0.967
GCA_001550065_04173
Unannotated protein.
  
 
 
 0.967
GCA_001550065_04169
Unannotated protein.
   
 
 0.965
GCA_001550065_04183
Unannotated protein.
   
 
 0.964
GCA_001550065_04182
Unannotated protein.
   
 
 0.963
GCA_001550065_00267
Unannotated protein.
 
 
 0.961
GCA_001550065_02219
Unannotated protein.
   
 
 0.961
Your Current Organism:
Kordiimonas lipolytica
NCBI taxonomy Id: 1662421
Other names: CGMCC 1.15304, JCM 30877, K. lipolytica, Kordiimonas lipolytica Wu et al. 2016, Kordiimonas sp. M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.