STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550065_01772Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_001550065_04306
Unannotated protein.
    
 0.640
GCA_001550065_03896
Unannotated protein.
   
 
  0.606
GCA_001550065_03101
Unannotated protein.
    
 0.548
GCA_001550065_01092
Unannotated protein.
  
 
  0.531
GCA_001550065_01632
Unannotated protein.
  
 
  0.531
GCA_001550065_02061
Unannotated protein.
  
 
  0.531
GCA_001550065_04278
Unannotated protein.
    
 0.511
GCA_001550065_01773
Unannotated protein.
       0.507
GCA_001550065_02576
Unannotated protein.
     
 0.501
GCA_001550065_00134
Unannotated protein.
     
 0.475
Your Current Organism:
Kordiimonas lipolytica
NCBI taxonomy Id: 1662421
Other names: CGMCC 1.15304, JCM 30877, K. lipolytica, Kordiimonas lipolytica Wu et al. 2016, Kordiimonas sp. M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.