STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550065_02454Unannotated protein. (227 aa)    
Predicted Functional Partners:
GCA_001550065_02455
Unannotated protein.
 0.996
GCA_001550065_00344
Unannotated protein.
  
 0.974
GCA_001550065_02860
Unannotated protein.
  
0.957
GCA_001550065_03322
Unannotated protein.
 
   
  0.870
GCA_001550065_00028
Unannotated protein.
 
    
0.789
GCA_001550065_01711
Unannotated protein.
  
     0.714
GCA_001550065_02456
Unannotated protein.
       0.710
GCA_001550065_01858
Unannotated protein.
   
 0.704
GCA_001550065_01983
Unannotated protein.
 
  
 
0.697
GCA_001550065_00684
Unannotated protein.
  
 
 
0.695
Your Current Organism:
Kordiimonas lipolytica
NCBI taxonomy Id: 1662421
Other names: CGMCC 1.15304, JCM 30877, K. lipolytica, Kordiimonas lipolytica Wu et al. 2016, Kordiimonas sp. M41, strain M41
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.