STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550065_03474Unannotated protein. (502 aa)    
Predicted Functional Partners:
GCA_001550065_00144
Unannotated protein.
    
  0.626
GCA_001550065_03341
Unannotated protein.
 
    0.610
GCA_001550065_03473
Unannotated protein.
       0.601
GCA_001550065_03537
Unannotated protein.
  
    0.599
GCA_001550065_01126
Unannotated protein.
    
  0.487
GCA_001550065_01666
Unannotated protein.
    
  0.487
GCA_001550065_03479
Unannotated protein.
  
    0.461
GCA_001550065_03475
Unannotated protein.
       0.459
GCA_001550065_03472
Unannotated protein.
       0.435
GCA_001550065_00143
Unannotated protein.
      0.415
Your Current Organism:
Kordiimonas lipolytica
NCBI taxonomy Id: 1662421
Other names: CGMCC 1.15304, JCM 30877, K. lipolytica, Kordiimonas lipolytica Wu et al. 2016, Kordiimonas sp. M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.