AHF62466.1 protein (Synechococcus sp. WH 8109)

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Score

AHF62466.1

DEAD/DEAH box helicase-like protein. (514 aa)

Predicted Functional Partners:

polA

0.861

acuC

0.837

deaD

0.790

rpoA

0.789

rpoB

0.787

dnaN

0.783

rpoZ

0.775

recQ

0.765

AHF64909.1

0.698

AHF64400.1

0.668

Your Current Organism:

Synechococcus sp. WH 8109

NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHF62466.1	AHF64400.1	Syncc8109_0040	Syncc8109_2059	DEAD/DEAH box helicase-like protein.	Hypothetical protein.	0.668
AHF62466.1	AHF64909.1	Syncc8109_0040	Syncc8109_2602	DEAD/DEAH box helicase-like protein.	Hypothetical protein.	0.698
AHF62466.1	acuC	Syncc8109_0040	Syncc8109_0914	DEAD/DEAH box helicase-like protein.	Putative histone deacetylase/AcuC/AphA family protein.	0.837
AHF62466.1	deaD	Syncc8109_0040	Syncc8109_0979	DEAD/DEAH box helicase-like protein.	DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	0.790
AHF62466.1	dnaN	Syncc8109_0040	Syncc8109_0001	DEAD/DEAH box helicase-like protein.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.783
AHF62466.1	polA	Syncc8109_0040	Syncc8109_2065	DEAD/DEAH box helicase-like protein.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.861
AHF62466.1	recQ	Syncc8109_0040	Syncc8109_0542	DEAD/DEAH box helicase-like protein.	ATP-dependent DNA helicase, RecQ family.	0.765
AHF62466.1	rpoA	Syncc8109_0040	Syncc8109_0357	DEAD/DEAH box helicase-like protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.789
AHF62466.1	rpoB	Syncc8109_0040	Syncc8109_2157	DEAD/DEAH box helicase-like protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.787
AHF62466.1	rpoZ	Syncc8109_0040	Syncc8109_2240	DEAD/DEAH box helicase-like protein.	Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.775
AHF64400.1	AHF62466.1	Syncc8109_2059	Syncc8109_0040	Hypothetical protein.	DEAD/DEAH box helicase-like protein.	0.668
AHF64400.1	acuC	Syncc8109_2059	Syncc8109_0914	Hypothetical protein.	Putative histone deacetylase/AcuC/AphA family protein.	0.402
AHF64909.1	AHF62466.1	Syncc8109_2602	Syncc8109_0040	Hypothetical protein.	DEAD/DEAH box helicase-like protein.	0.698
acuC	AHF62466.1	Syncc8109_0914	Syncc8109_0040	Putative histone deacetylase/AcuC/AphA family protein.	DEAD/DEAH box helicase-like protein.	0.837
acuC	AHF64400.1	Syncc8109_0914	Syncc8109_2059	Putative histone deacetylase/AcuC/AphA family protein.	Hypothetical protein.	0.402
deaD	AHF62466.1	Syncc8109_0979	Syncc8109_0040	DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	DEAD/DEAH box helicase-like protein.	0.790
deaD	polA	Syncc8109_0979	Syncc8109_2065	DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.436
deaD	recQ	Syncc8109_0979	Syncc8109_0542	DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	ATP-dependent DNA helicase, RecQ family.	0.947
deaD	rpoA	Syncc8109_0979	Syncc8109_0357	DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.639
deaD	rpoB	Syncc8109_0979	Syncc8109_2157	DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.558