STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62513.1Putative transporter component. (394 aa)    
Predicted Functional Partners:
AHF62514.1
Putative multidrug efflux ABC transporter.
 
 
 0.987
AHF64736.1
Putative RND family outer membrane efflux protein.
 
 
 0.855
AHF62515.1
Hypothetical protein.
 
     0.846
AHF62522.1
Hemolysin-type calcium-binding region.
 
  
 0.604
AHF63377.1
Hypothetical protein.
  
     0.601
AHF64670.1
Hypothetical protein.
  
     0.583
AHF63607.1
Putative ABC transporter.
  
  
 0.544
AHF63824.1
DevC protein.
  
  
 0.544
AHF62555.1
Hypothetical protein.
  
     0.536
AHF64832.1
Hypothetical protein.
  
   
 0.536
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.