STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62515.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
AHF62514.1
Putative multidrug efflux ABC transporter.
 
  
 0.914
AHF62513.1
Putative transporter component.
 
     0.846
AHF62744.1
Hypothetical protein.
 
     0.787
AHF62930.1
Hypothetical protein.
  
     0.766
AHF64670.1
Hypothetical protein.
  
  
 0.765
AHF64671.1
Hypothetical protein.
  
     0.751
AHF63377.1
Hypothetical protein.
  
     0.746
ftrV
Putative ferredoxin-thioredoxin reductase, variable chain.
  
     0.745
AHF64206.1
Hypothetical protein.
  
     0.738
AHF64776.1
Hypothetical protein.
 
     0.738
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.