Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AHF62522.1Hemolysin-type calcium-binding region. (1268 aa)    
Predicted Functional Partners:
AHF62514.1
Putative multidrug efflux ABC transporter.
 
  
 0.826
AHF62987.1
Large exoprotein involved in heme utilization or adhesion.
 
 0.800
AHF62523.1
Putative glycosyltransferase.
 
   
 0.786
AHF62513.1
Putative transporter component.
 
  
 0.587
AHF64158.1
Hypothetical protein.
 
 0.513
AHF64118.1
Hypothetical protein.
 
 0.485
AHF64627.1
Putative methyltransferase type 11.
  
     0.440
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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