STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62527.1ABC transporter, ATP binding protein. (454 aa)    
Predicted Functional Partners:
AHF62519.1
Putative glycosyltransferase.
 
 
 0.639
AHF64784.1
Putative glycosyl transferase.
 
  
 0.626
AHF62894.1
Hypothetical protein.
   
    0.625
manC
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.578
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
      
 0.509
AHF64764.1
Hypothetical protein.
 
  
 0.455
AHF62517.1
Putative glycosyltransferase.
 
  
 0.427
AHF64652.1
Putative integrase/recombinase.
   
    0.403
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.