STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF62551.1Twin-arginine translocation pathway signal. (435 aa)    
Predicted Functional Partners:
lacF
Lactose transport system permease protein.
 
 0.994
AHF64374.1
Putative permease protein of sugar ABC transporter.
 
 0.989
AHF63622.1
ABC transporter for possibly for trehalose/maltose, membrane component.
 
 0.958
AHF62949.1
ATPase; Belongs to the ABC transporter superfamily.
 
 0.937
AHF63621.1
ABC transporter, likely for trehalose/maltose, membrane component.
 
 0.908
AHF63620.1
ATPase; Belongs to the ABC transporter superfamily.
  
 0.906
AHF62550.1
Hypothetical protein.
       0.811
AHF63892.1
Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family.
  
  
  0.786
AHF64395.1
ABC transporter, substrate binding protein.
     
 0.776
futC
ATPase; Belongs to the ABC transporter superfamily.
   
 
 0.769
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.