STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62559.1Serine/threonine protein kinase. (556 aa)    
Predicted Functional Partners:
AHF62555.1
Hypothetical protein.
 
     0.741
AHF62558.1
Hypothetical protein.
  
  
 0.678
AHF64832.1
Hypothetical protein.
  
   
 0.663
AHF63682.1
Hypothetical protein.
  
     0.649
AHF63062.1
Hypothetical protein.
  
     0.639
AHF62557.1
Hypothetical protein.
     
 0.580
cypX
Cytochrome P450 family protein.
  
     0.565
AHF63111.1
Hypothetical protein.
  
     0.559
AHF63696.1
Hypothetical protein.
  
     0.558
AHF63883.1
Hypothetical protein.
  
     0.544
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.