STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF62565.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
rpcE
Phycobilin lyase alpha subunit.
  
   
 0.800
AHF62563.1
Peptidase M20D, amidohydrolase.
       0.773
AHF62564.1
Hypothetical protein.
       0.773
AHF63062.1
Hypothetical protein.
  
     0.772
AHF62669.1
Hypothetical protein.
  
     0.766
AHF63111.1
Hypothetical protein.
  
     0.764
cpcT
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.760
AHF63335.1
Hypothetical protein.
  
     0.760
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.757
AHF62562.1
Hypothetical protein.
       0.757
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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