STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62593.1Hypothetical protein. (348 aa)    
Predicted Functional Partners:
AHF62591.1
Hypothetical protein.
 
     0.804
ho1
Heme oxygenase (decyclizing).
   
   0.775
AHF63671.1
Hypothetical protein.
  
     0.740
AHF63335.1
Hypothetical protein.
  
     0.720
AHF63241.1
Hypothetical protein.
  
     0.709
AHF65048.1
Hypothetical protein.
  
     0.703
AHF64510.1
Hypothetical protein.
  
   
 0.700
AHF64670.1
Hypothetical protein.
  
     0.700
AHF64671.1
Hypothetical protein.
  
     0.681
psbX
Photosystem II PsbX protein; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
  
     0.680
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.