STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62609.1Photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. (333 aa)    
Predicted Functional Partners:
rub
Putative rubredoxin.
 
   
 0.958
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis.
  
   
 0.834
psb27
Putative photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
   
 0.818
psbO
Photosystem II manganese-stabilizing polypeptide.
  
   
 0.790
psbA2
Photosystem II D1 protein form II; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
  
 
   0.780
psbA2-2
Photosystem II D1 protein form II.
  
 
   0.780
AHF63886.1
Hypothetical protein.
  
   
 0.780
AHF64323.1
Hypothetical protein.
  
     0.769
AHF64667.1
Hypothetical protein.
  
     0.766
psb28
Putative photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
  
   
 0.764
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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