STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62618.1ABC transporter, ATP binding component. (572 aa)    
Predicted Functional Partners:
AHF63549.1
ATPase.
  
     0.739
AHF64792.1
ATPase.
  
     0.726
AHF63758.1
ATPase.
  
     0.691
AHF62615.1
ATPase.
  
     0.640
AHF63038.1
ATPase.
  
     0.578
AHF62619.1
NUDIX hydrolase.
       0.557
AHF62620.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
       0.557
cysRS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.541
AHF63620.1
ATPase; Belongs to the ABC transporter superfamily.
  
     0.528
futC
ATPase; Belongs to the ABC transporter superfamily.
  
     0.506
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.