STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rffMGlycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family. (244 aa)    
Predicted Functional Partners:
AHF62664.1
Putative glycosyltransferase.
 
 
 0.964
AHF63619.1
Hypothetical protein.
   
 0.881
AHF63360.1
Cell envelope-related function transcriptional attenuator common domain protein.
 
   
 0.591
AHF64239.1
Undecaprenyl-phosphate galactosephosphotransferase.
    
 0.574
AHF62644.1
Putative phosphorylase kinase.
       0.572
nfrC
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.527
AHF63389.1
Cell envelope-related function transcriptional attenuator common domain protein.
 
   
 0.499
AHF62689.1
Putative bicarbonate transporter, ICT family.
 
     0.424
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.