STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62649.1Histidine kinase. (373 aa)    
Predicted Functional Partners:
AHF62552.1
Two component transcriptional regulator, winged helix family.
  
 
 0.729
AHF63338.1
Two component transcriptional regulator, winged helix family.
  
 
 0.721
rpaA
Two component transcriptional regulator, winged helix family.
  
 
 0.705
rpaB
Two component transcriptional regulator, winged helix family.
  
 
 0.700
phoB
Two component transcriptional regulator, winged helix family.
  
 
 0.693
AHF64845.1
Two component transcriptional regulator, LuxR family.
 
 
 
 0.676
glsF
Glutamate synthase (NADPH).
      
 0.583
AHF64179.1
Two component transcriptional regulator, winged helix family.
  
 
 0.568
nblS
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.514
AHF62650.1
Hypothetical protein.
       0.468
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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