Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF62660.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
AHF62659.1
Hypothetical protein.
       0.811
AHF63219.1
Hypothetical protein.
  
     0.735
AHF63186.1
Hypothetical protein.
  
     0.725
AHF63131.1
Hypothetical protein.
  
     0.700
AHF62661.1
Hypothetical protein.
       0.699
AHF63248.1
Hypothetical protein.
  
     0.697
AHF64023.1
Hypothetical protein.
  
     0.697
AHF62741.1
Hypothetical protein.
  
     0.695
AHF64397.1
Hypothetical protein.
  
     0.685
AHF65069.1
Hypothetical protein.
  
     0.658
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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