Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF62676.1 | psbH | Syncc8109_0265 | Syncc8109_0262 | Hypothetical protein. | Photosystem II reaction center protein PsbH; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.599 |
| AHF62676.1 | psbN | Syncc8109_0265 | Syncc8109_0261 | Hypothetical protein. | Photosystem II reaction centre N protein (psbN); May play a role in photosystem I and II biogenesis. Belongs to the PsbN family. | 0.669 |
| AHF62676.1 | pth | Syncc8109_0265 | Syncc8109_0264 | Hypothetical protein. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.640 |
| AHF62676.1 | tatA | Syncc8109_0265 | Syncc8109_0263 | Hypothetical protein. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.618 |
| AHF64343.1 | tatA | Syncc8109_1999 | Syncc8109_0263 | Hypothetical protein. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.771 |
| AHF64994.1 | guaA | Syncc8109_2688 | Syncc8109_0052 | Glutamine amidotransferase class-I. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.905 |
| AHF64994.1 | tatA | Syncc8109_2688 | Syncc8109_0263 | Glutamine amidotransferase class-I. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.465 |
| guaA | AHF64994.1 | Syncc8109_0052 | Syncc8109_2688 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glutamine amidotransferase class-I. | 0.905 |
| guaA | hisIE | Syncc8109_0052 | Syncc8109_1683 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Histidine biosynthesis bifunctional protein HisIE; In the N-terminal section; belongs to the PRA-CH family. | 0.426 |
| guaA | pth | Syncc8109_0052 | Syncc8109_0264 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.570 |
| guaA | tatA | Syncc8109_0052 | Syncc8109_0263 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.975 |
| hisIE | guaA | Syncc8109_1683 | Syncc8109_0052 | Histidine biosynthesis bifunctional protein HisIE; In the N-terminal section; belongs to the PRA-CH family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.426 |
| hisIE | tatA | Syncc8109_1683 | Syncc8109_0263 | Histidine biosynthesis bifunctional protein HisIE; In the N-terminal section; belongs to the PRA-CH family. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.536 |
| moaC | tatA | Syncc8109_2712 | Syncc8109_0263 | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.478 |
| moaC | tatC | Syncc8109_2712 | Syncc8109_0689 | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.436 |
| psbH | AHF62676.1 | Syncc8109_0262 | Syncc8109_0265 | Photosystem II reaction center protein PsbH; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | Hypothetical protein. | 0.599 |
| psbH | psbN | Syncc8109_0262 | Syncc8109_0261 | Photosystem II reaction center protein PsbH; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | Photosystem II reaction centre N protein (psbN); May play a role in photosystem I and II biogenesis. Belongs to the PsbN family. | 0.766 |
| psbH | pth | Syncc8109_0262 | Syncc8109_0264 | Photosystem II reaction center protein PsbH; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.770 |
| psbH | tatA | Syncc8109_0262 | Syncc8109_0263 | Photosystem II reaction center protein PsbH; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.801 |
| psbN | AHF62676.1 | Syncc8109_0261 | Syncc8109_0265 | Photosystem II reaction centre N protein (psbN); May play a role in photosystem I and II biogenesis. Belongs to the PsbN family. | Hypothetical protein. | 0.669 |
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