Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF62739.1Hypothetical protein. (561 aa)    
Predicted Functional Partners:
glsF
Glutamate synthase (NADPH).
       0.742
AHF64387.1
Hypothetical protein.
  
     0.724
AHF63619.1
Hypothetical protein.
 
     0.704
AHF62712.1
Hypothetical protein.
  
     0.694
AHF62738.1
Hypothetical protein.
       0.666
AHF62654.1
Hypothetical protein.
  
     0.664
AHF63682.1
Hypothetical protein.
  
     0.663
AHF63360.1
Cell envelope-related function transcriptional attenuator common domain protein.
 
     0.657
AHF63377.1
Hypothetical protein.
  
     0.618
AHF64320.1
Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.618
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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