STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62741.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
glsF
Glutamate synthase (NADPH).
       0.845
AHF62660.1
Hypothetical protein.
  
     0.695
AHF62738.1
Hypothetical protein.
 
     0.614
AHF64344.1
Hypothetical protein.
  
     0.594
AHF64227.1
Hypothetical protein.
  
     0.572
AHF63131.1
Hypothetical protein.
  
     0.548
AHF62739.1
Hypothetical protein.
       0.534
AHF63886.1
Hypothetical protein.
  
     0.526
AHF63795.1
Hypothetical protein.
  
     0.519
AHF63937.1
Zeta-carotene desaturase-like protein.
  
     0.519
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.