truA protein (Synechococcus sp. WH 8109) - STRING interaction network

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truA

tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (293 aa)

Predicted Functional Partners:

rpoA

0.919

rpl17

0.909

AHF62805.1

0.849

rsmH

0.828

truB

0.821

panC

0.730

rps9

0.727

rpl13

0.665

rps11

0.638

ybeY

0.636

Your Current Organism:

Synechococcus sp. WH 8109

NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHF62805.1	rpl13	Syncc8109_0401	Syncc8109_0354	Rhodanese-like protein.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.486
AHF62805.1	rpl17	Syncc8109_0401	Syncc8109_0356	Rhodanese-like protein.	50S ribosomal protein L17.	0.630
AHF62805.1	truA	Syncc8109_0401	Syncc8109_0355	Rhodanese-like protein.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.849
AHF62805.1	ybeY	Syncc8109_0401	Syncc8109_2554	Rhodanese-like protein.	Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.742
panC	rps9	Syncc8109_0433	Syncc8109_0353	Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.691
panC	truA	Syncc8109_0433	Syncc8109_0355	Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.730
rpl13	AHF62805.1	Syncc8109_0354	Syncc8109_0401	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Rhodanese-like protein.	0.486
rpl13	rpl17	Syncc8109_0354	Syncc8109_0356	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L17.	0.995
rpl13	rpoA	Syncc8109_0354	Syncc8109_0357	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.977
rpl13	rps11	Syncc8109_0354	Syncc8109_0358	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.996
rpl13	rps9	Syncc8109_0354	Syncc8109_0353	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
rpl13	truA	Syncc8109_0354	Syncc8109_0355	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.665
rpl13	truB	Syncc8109_0354	Syncc8109_2220	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.675
rpl13	ybeY	Syncc8109_0354	Syncc8109_2554	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.620
rpl17	AHF62805.1	Syncc8109_0356	Syncc8109_0401	50S ribosomal protein L17.	Rhodanese-like protein.	0.630
rpl17	rpl13	Syncc8109_0356	Syncc8109_0354	50S ribosomal protein L17.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
rpl17	rpoA	Syncc8109_0356	Syncc8109_0357	50S ribosomal protein L17.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.988
rpl17	rps11	Syncc8109_0356	Syncc8109_0358	50S ribosomal protein L17.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.995
rpl17	rps9	Syncc8109_0356	Syncc8109_0353	50S ribosomal protein L17.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.996
rpl17	truA	Syncc8109_0356	Syncc8109_0355	50S ribosomal protein L17.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.909