Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF62796.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
AHF62797.1
Hypothetical protein.
 
     0.814
AHF62798.1
Hypothetical protein.
 
     0.811
AHF63083.1
Hypothetical protein.
  
     0.774
rpaC
Putative regulator.
  
     0.774
AHF64206.1
Hypothetical protein.
  
     0.774
chpX
CO2 hydration protein.
  
     0.774
AHF63020.1
Hypothetical protein.
  
     0.770
AHF64510.1
Hypothetical protein.
  
     0.766
AHF63610.1
Hypothetical protein.
  
     0.764
AHF64522.1
Hypothetical protein.
  
     0.763
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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