Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pexPutative Pex protein. (127 aa)    
Predicted Functional Partners:
hli8
Putative high light inducible protein.
  
     0.740
AHF64320.1
Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.729
AHF63228.1
Hypothetical protein.
  
     0.728
nrdJ
Ribonucleotide reductase (class II).
  
     0.725
AHF63725.1
Hypothetical protein.
  
     0.696
AHF62821.1
Hypothetical protein.
       0.682
AHF64319.1
Hypothetical protein.
  
     0.668
AHF64770.1
Hypothetical protein.
  
     0.658
gph
Putative HAD superfamily phosphatase.
 
     0.653
AHF62712.1
Hypothetical protein.
  
     0.635
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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