Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mpeUPBS lyase HEAT-like repeat protein. (298 aa)    
Predicted Functional Partners:
AHF62862.1
PBS lyase HEAT-like repeat protein.
 
  
 0.986
cpeA
C-phycoerythrin class I alpha chain.
  
  
 0.976
mpeA
Class II phycoerythrin alpha-subunit.
  
  
 0.976
cpeC
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
 0.976
cpeB
C-phycoerythrin class I beta chain.
  
  
 0.975
apcE
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
  0.974
mpeB
C-phycoerythrin class II beta chain.
  
  
 0.973
cpeE
Putative phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
  0.971
mpeC
C-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
  0.960
pebB
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
  
   
 0.777
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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