Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHF62862.1 | apcE | Syncc8109_0462 | Syncc8109_0468 | PBS lyase HEAT-like repeat protein. | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | 0.975 |
AHF62862.1 | apcE-2 | Syncc8109_0462 | Syncc8109_2277 | PBS lyase HEAT-like repeat protein. | Anchor polypeptide LCM; Belongs to the phycobilisome linker protein family. | 0.450 |
AHF62862.1 | cpcG1 | Syncc8109_0462 | Syncc8109_2372 | PBS lyase HEAT-like repeat protein. | Phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5); Belongs to the phycobilisome linker protein family. | 0.446 |
AHF62862.1 | cpeB | Syncc8109_0462 | Syncc8109_0444 | PBS lyase HEAT-like repeat protein. | C-phycoerythrin class I beta chain. | 0.979 |
AHF62862.1 | cpeC | Syncc8109_0462 | Syncc8109_0469 | PBS lyase HEAT-like repeat protein. | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | 0.976 |
AHF62862.1 | cpeE | Syncc8109_0462 | Syncc8109_0467 | PBS lyase HEAT-like repeat protein. | Putative phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | 0.974 |
AHF62862.1 | mpeA | Syncc8109_0462 | Syncc8109_0460 | PBS lyase HEAT-like repeat protein. | Class II phycoerythrin alpha-subunit. | 0.984 |
AHF62862.1 | mpeB | Syncc8109_0462 | Syncc8109_0461 | PBS lyase HEAT-like repeat protein. | C-phycoerythrin class II beta chain. | 0.986 |
AHF62862.1 | mpeC | Syncc8109_0462 | Syncc8109_0459 | PBS lyase HEAT-like repeat protein. | C-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family. | 0.969 |
AHF62862.1 | mpeU | Syncc8109_0462 | Syncc8109_0457 | PBS lyase HEAT-like repeat protein. | PBS lyase HEAT-like repeat protein. | 0.980 |
apcE | AHF62862.1 | Syncc8109_0468 | Syncc8109_0462 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | PBS lyase HEAT-like repeat protein. | 0.975 |
apcE | apcE-2 | Syncc8109_0468 | Syncc8109_2277 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | Anchor polypeptide LCM; Belongs to the phycobilisome linker protein family. | 0.732 |
apcE | cpcG1 | Syncc8109_0468 | Syncc8109_2372 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | Phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5); Belongs to the phycobilisome linker protein family. | 0.766 |
apcE | cpeB | Syncc8109_0468 | Syncc8109_0444 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | C-phycoerythrin class I beta chain. | 0.987 |
apcE | cpeC | Syncc8109_0468 | Syncc8109_0469 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | 0.970 |
apcE | cpeE | Syncc8109_0468 | Syncc8109_0467 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | Putative phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | 0.954 |
apcE | mpeA | Syncc8109_0468 | Syncc8109_0460 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | Class II phycoerythrin alpha-subunit. | 0.987 |
apcE | mpeB | Syncc8109_0468 | Syncc8109_0461 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | C-phycoerythrin class II beta chain. | 0.987 |
apcE | mpeC | Syncc8109_0468 | Syncc8109_0459 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | C-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family. | 0.909 |
apcE | mpeU | Syncc8109_0468 | Syncc8109_0457 | Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family. | PBS lyase HEAT-like repeat protein. | 0.974 |
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