STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62862.1PBS lyase HEAT-like repeat protein. (398 aa)    
Predicted Functional Partners:
mpeB
C-phycoerythrin class II beta chain.
 
  
 0.986
mpeA
Class II phycoerythrin alpha-subunit.
 
  
 0.984
cpeA
C-phycoerythrin class I alpha chain.
 
  
 0.980
mpeU
PBS lyase HEAT-like repeat protein.
 
  
 0.980
cpeB
C-phycoerythrin class I beta chain.
  
  
 0.979
cpeC
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
 0.976
apcE
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
 0.975
cpeE
Putative phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
 0.974
mpeC
C-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
 0.969
pebA
15,16 dihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
  
   
 0.803
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.