STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62874.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
AHF62875.1
Hypothetical protein.
       0.555
AHF63984.1
Membrane protein.
  
  
 0.528
AHF62872.1
Putative phycobilisome polypeptide.
       0.516
AHF62873.1
Hypothetical protein.
       0.516
AHF64200.1
Hypothetical protein.
  
 
   0.503
hupE
Putative hydrogenase accessory protein.
  
     0.502
AHF63099.1
Putative phosphoribosyltransferase family protein.
  
     0.453
AHF65007.1
Hypothetical protein.
  
     0.440
AHF64948.1
Hypothetical protein.
  
     0.420
AHF62650.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.