Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF62466.1 | deaD | Syncc8109_0040 | Syncc8109_0979 | DEAD/DEAH box helicase-like protein. | DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.688 |
| AHF62466.1 | pcrA | Syncc8109_0040 | Syncc8109_0179 | DEAD/DEAH box helicase-like protein. | ATP-dependent DNA helicase PcrA. | 0.429 |
| AHF62466.1 | polA | Syncc8109_0040 | Syncc8109_2065 | DEAD/DEAH box helicase-like protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.891 |
| AHF62466.1 | recA | Syncc8109_0040 | Syncc8109_0389 | DEAD/DEAH box helicase-like protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.734 |
| AHF62466.1 | recQ | Syncc8109_0040 | Syncc8109_0542 | DEAD/DEAH box helicase-like protein. | ATP-dependent DNA helicase, RecQ family. | 0.766 |
| AHF62466.1 | topA | Syncc8109_0040 | Syncc8109_0655 | DEAD/DEAH box helicase-like protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.569 |
| AHF63585.1 | pcrA | Syncc8109_1215 | Syncc8109_0179 | Putative transcripton factor. | ATP-dependent DNA helicase PcrA. | 0.521 |
| AHF63585.1 | polA | Syncc8109_1215 | Syncc8109_2065 | Putative transcripton factor. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.990 |
| AHF63585.1 | recA | Syncc8109_1215 | Syncc8109_0389 | Putative transcripton factor. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.768 |
| AHF63585.1 | recQ | Syncc8109_1215 | Syncc8109_0542 | Putative transcripton factor. | ATP-dependent DNA helicase, RecQ family. | 0.925 |
| AHF63585.1 | topA | Syncc8109_1215 | Syncc8109_0655 | Putative transcripton factor. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.760 |
| AHF64908.1 | deaD | Syncc8109_2601 | Syncc8109_0979 | DEAD/DEAH box helicase-like protein. | DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.671 |
| AHF64908.1 | pcrA | Syncc8109_2601 | Syncc8109_0179 | DEAD/DEAH box helicase-like protein. | ATP-dependent DNA helicase PcrA. | 0.429 |
| AHF64908.1 | polA | Syncc8109_2601 | Syncc8109_2065 | DEAD/DEAH box helicase-like protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.891 |
| AHF64908.1 | recA | Syncc8109_2601 | Syncc8109_0389 | DEAD/DEAH box helicase-like protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.734 |
| AHF64908.1 | recQ | Syncc8109_2601 | Syncc8109_0542 | DEAD/DEAH box helicase-like protein. | ATP-dependent DNA helicase, RecQ family. | 0.745 |
| AHF64908.1 | topA | Syncc8109_2601 | Syncc8109_0655 | DEAD/DEAH box helicase-like protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.569 |
| deaD | AHF62466.1 | Syncc8109_0979 | Syncc8109_0040 | DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | DEAD/DEAH box helicase-like protein. | 0.688 |
| deaD | AHF64908.1 | Syncc8109_0979 | Syncc8109_2601 | DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | DEAD/DEAH box helicase-like protein. | 0.671 |
| deaD | polA | Syncc8109_0979 | Syncc8109_2065 | DEAD/DEAH box helicase-like protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.432 |
page 1 of 4