STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF62987.1Large exoprotein involved in heme utilization or adhesion. (1930 aa)    
Predicted Functional Partners:
AHF62522.1
Hemolysin-type calcium-binding region.
 
 
 0.792
AHF64084.1
Subtilisin-like serine proteases-like protein; Belongs to the peptidase S8 family.
  
 
 0.627
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.614
AHF62514.1
Putative multidrug efflux ABC transporter.
 
  
 0.489
AHF62523.1
Putative glycosyltransferase.
  
     0.462
AHF64627.1
Putative methyltransferase type 11.
  
     0.431
AHF62986.1
Hypothetical protein.
       0.415
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.