rsmI protein (Synechococcus sp. WH 8109) - STRING interaction network

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Score

rsmI

Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (285 aa)

Predicted Functional Partners:

AHF63011.1

0.769

cysQ

0.640

rps6

0.610

cumB

0.607

rps17

0.594

rps21

0.593

rpsN

0.591

rps16

0.554

rps7

0.543

gidB

0.541

Your Current Organism:

Synechococcus sp. WH 8109

NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHF63011.1	cysQ	Syncc8109_0626	Syncc8109_0628	Hypothetical protein.	CysQ protein-like protein.	0.552
AHF63011.1	rsmI	Syncc8109_0626	Syncc8109_0627	Hypothetical protein.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.769
cumB	rsmI	Syncc8109_1472	Syncc8109_0627	Cytidine/deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.607
cysQ	AHF63011.1	Syncc8109_0628	Syncc8109_0626	CysQ protein-like protein.	Hypothetical protein.	0.552
cysQ	rsmI	Syncc8109_0628	Syncc8109_0627	CysQ protein-like protein.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.640
gidB	rsmI	Syncc8109_2144	Syncc8109_0627	Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.541
rps16	rps17	Syncc8109_1846	Syncc8109_0371	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.995
rps16	rps21	Syncc8109_1846	Syncc8109_1620	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.997
rps16	rps6	Syncc8109_1846	Syncc8109_2747	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.997
rps16	rps7	Syncc8109_1846	Syncc8109_0327	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.997
rps16	rpsN	Syncc8109_1846	Syncc8109_0630	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.995
rps16	rsmI	Syncc8109_1846	Syncc8109_0627	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.554
rps17	rps16	Syncc8109_0371	Syncc8109_1846	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rps17	rps21	Syncc8109_0371	Syncc8109_1620	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.978
rps17	rps6	Syncc8109_0371	Syncc8109_2747	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.998
rps17	rps7	Syncc8109_0371	Syncc8109_0327	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.999
rps17	rpsN	Syncc8109_0371	Syncc8109_0630	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.997
rps17	rsmI	Syncc8109_0371	Syncc8109_0627	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.594
rps21	rps16	Syncc8109_1620	Syncc8109_1846	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rps21	rps17	Syncc8109_1620	Syncc8109_0371	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.978