AHF63020.1 protein (Synechococcus sp. WH 8109)

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Score

AHF63020.1

Hypothetical protein. (178 aa)

Predicted Functional Partners:

rpl32

0.956

rplK

0.895

rpl13

0.885

yidC

0.879

rps16

0.877

AHF63022.1

0.868

rpl21

0.865

rps6

0.863

rpl4

0.856

rps2

0.841

Your Current Organism:

Synechococcus sp. WH 8109

NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHF63020.1	AHF63022.1	Syncc8109_0635	Syncc8109_0637	Hypothetical protein.	Hypothetical protein.	0.868
AHF63020.1	rpl13	Syncc8109_0635	Syncc8109_0354	Hypothetical protein.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.885
AHF63020.1	rpl21	Syncc8109_0635	Syncc8109_2217	Hypothetical protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.865
AHF63020.1	rpl32	Syncc8109_0635	Syncc8109_1343	Hypothetical protein.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.956
AHF63020.1	rpl4	Syncc8109_0635	Syncc8109_0379	Hypothetical protein.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.856
AHF63020.1	rplK	Syncc8109_0635	Syncc8109_2581	Hypothetical protein.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.895
AHF63020.1	rps16	Syncc8109_0635	Syncc8109_1846	Hypothetical protein.	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.877
AHF63020.1	rps2	Syncc8109_0635	Syncc8109_1458	Hypothetical protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.841
AHF63020.1	rps6	Syncc8109_0635	Syncc8109_2747	Hypothetical protein.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.863
AHF63020.1	yidC	Syncc8109_0635	Syncc8109_0636	Hypothetical protein.	Similar to 60 kDa inner membrane protein family.	0.879
AHF63022.1	AHF63020.1	Syncc8109_0637	Syncc8109_0635	Hypothetical protein.	Hypothetical protein.	0.868
AHF63022.1	yidC	Syncc8109_0637	Syncc8109_0636	Hypothetical protein.	Similar to 60 kDa inner membrane protein family.	0.880
rpl13	AHF63020.1	Syncc8109_0354	Syncc8109_0635	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein.	0.885
rpl13	rpl21	Syncc8109_0354	Syncc8109_2217	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rpl13	rpl32	Syncc8109_0354	Syncc8109_1343	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.987
rpl13	rpl4	Syncc8109_0354	Syncc8109_0379	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.996
rpl13	rplK	Syncc8109_0354	Syncc8109_2581	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.994
rpl13	rps16	Syncc8109_0354	Syncc8109_1846	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.988
rpl13	rps2	Syncc8109_0354	Syncc8109_1458	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.994
rpl13	rps6	Syncc8109_0354	Syncc8109_2747	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.989