Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHF63027.1Putative SMR family transporter, possible PecM. (310 aa)    
Predicted Functional Partners:
AHF63029.1
Hypothetical protein.
  
    0.811
AHF63028.1
Putative UDP-glucose:tetrahydrobiopterin glucosyltransferase.
  
    0.810
AHF63767.1
Hypothetical protein.
  
     0.684
AHF64056.1
Hypothetical protein.
  
     0.642
tyrA
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.635
sppA
Signal peptide peptidase SppA, 36K type.
       0.635
AHF63694.1
Hypothetical protein.
  
     0.615
AHF64663.1
Hypothetical protein.
  
     0.584
AHF63042.1
Hypothetical protein.
  
     0.581
AHF62486.1
Hypothetical protein.
  
     0.568
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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