STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63029.1Hypothetical protein. (598 aa)    
Predicted Functional Partners:
AHF63027.1
Putative SMR family transporter, possible PecM.
  
    0.811
AHF63028.1
Putative UDP-glucose:tetrahydrobiopterin glucosyltransferase.
       0.773
AHF62753.1
Glycosyl transferase, family 2.
  
  
 0.767
arnT
PMT family 4-amino-4-deoxy-L-arabinose transferase/ glycosyltransferase.
  
     0.703
tyrA
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.635
sppA
Signal peptide peptidase SppA, 36K type.
       0.635
AHF64784.1
Putative glycosyl transferase.
 
  
 0.616
AHF63598.1
Hypothetical protein.
  
     0.608
AHF63113.1
Hypothetical protein.
 
  
 0.594
AHF64398.1
Putative multidrug efflux transporter, MFS family.
  
     0.525
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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